BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B04LP1|AL426954
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1742 0.0
>3x_Contig1800
Length = 38778
Score = 1742 bits (876), Expect = 0.0
Identities = 886/892 (99%)
Strand = Plus / Minus
Query: 1 gtgccggtccacagacactcaaggcaccaccagaaccgatgaataaaccagtaccgattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28446 gtgccggtccacagacactcaaggcaccaccagaaccgatgaataaaccagtaccgattg 28387
Query: 61 cactacctaaagcaatcaattggatatgtcttgtttttagccctctaacgattttttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28386 cactacctaaagcaatcaattggatatgtcttgtttttagccctctaacgattttttgtg 28327
Query: 121 ggggtttgaagttctcgatatcggagtacgatccttggtctgaatctccaatgwcatckt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 28326 ggggtttgaagttctcgatatcggagtacgatccttggtctgaatctccaatgacatcgt 28267
Query: 181 taactgaagaaaaggcctgttccttgattctattcgatatgtacggcgaaagagaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28266 taactgaagaaaaggcctgttccttgattctattcgatatgtacggcgaaagagaaatgg 28207
Query: 241 aggcttgttgggatagctctwatttcttagacatggtgtatagggtatgttatgttcttt 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 28206 aggcttgttgggatagctctaatttcttagacatggtgtatagggtatgttatgttcttt 28147
Query: 301 tgaacttcaaaatcttcccttggttatgtaaatgaacactttactagagtttgtccttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28146 tgaacttcaaaatcttcccttggttatgtaaatgaacactttactagagtttgtccttaa 28087
Query: 361 tggattcagcagtgatatcttttagtgatgccgcaacggaagcactaatctagattgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28086 tggattcagcagtgatatcttttagtgatgccgcaacggaagcactaatctagattgtaa 28027
Query: 421 gatatttaacaactagatcatcagttgctaataacataactctgtagtgttcatcacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28026 gatatttaacaactagatcatcagttgctaataacataactctgtagtgttcatcacagc 27967
Query: 481 ttcttatatacgttttgatttcctatgatagaagactcaattggtgttcaaaaccctgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27966 ttcttatatacgttttgatttcctatgatagaagactcaattggtgttcaaaaccctgta 27907
Query: 541 tgcgttttgaaattgataagtggatatagataaaggaagaacataagtgcatttccctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27906 tgcgttttgaaattgataagtggatatagataaaggaagaacataagtgcatttccctga 27847
Query: 601 cgtcaaacagatctttagatcctaatcaacattcaagggattaatcttagatatccatta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27846 cgtcaaacagatctttagatcctaatcaacattcaagggattaatcttagatatccatta 27787
Query: 661 tcctaatcttcgtcataacttaaagcagaacaaaatctgaccaactctaactggtattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27786 tcctaatcttcgtcataacttaaagcagaacaaaatctgaccaactctaactggtattcc 27727
Query: 721 tttagagctgcaactgtaatttccccattctatccacgccagcagctgtcctggccgata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27726 tttagagctgcaactgtaatttccccattctatccacgccagcagctgtcctggccgata 27667
Query: 781 acctgatcttgccatgcacaaagagaaaagaaatcaatattggggacagttacggcaact 840
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 27666 acctgatcttgccatgcacaaagagaaaagaaatcaatattgggaacagttacggcaact 27607
Query: 841 cataatcaaaaatccccaaacaacgcctgcgttatctagcatatytcaacgg 892
|||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 27606 cataatcaaaaatccccaaacaacgcctgcgtaatctagcatatctcaacgg 27555
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6359
Number of Sequences: 1807
Number of extensions: 6359
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)